Tispark 2.1.4启动Spark Thrift Server异常求助

安装好Tispark 2.1.4后,通过start-thriftserver.sh启动Spark Thrift Server失败,查看启动日志报出如下异常:
19/09/12 15:29:17 ERROR ConnectionHandle: Database access problem. Killing off this connection and all remaining connections in the connection pool. SQL State = HY000

19/09/12 15:29:17 WARN Query: Query for candidates of org.apache.hadoop.hive.metastore.model.MDatabase and subclasses resulted in no possible candidates
The isolation level ‘SERIALIZABLE’ is not supported. Set tidb_skip_isolation_level_check=1 to skip this error
org.datanucleus.exceptions.NucleusDataStoreException: The isolation level ‘SERIALIZABLE’ is not supported. Set tidb_skip_isolation_level_check=1 to skip this error
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:477)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.getCurrentConnection(AbstractSchemaTransaction.java:90)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.performTablesValidation(RDBMSStoreManager.java:3380)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.addClassTablesAndValidate(RDBMSStoreManager.java:3190)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.run(RDBMSStoreManager.java:2841)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.execute(AbstractSchemaTransaction.java:122)
at org.datanucleus.store.rdbms.RDBMSStoreManager.addClasses(RDBMSStoreManager.java:1605)
at org.datanucleus.store.AbstractStoreManager.addClass(AbstractStoreManager.java:954)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getDatastoreClass(RDBMSStoreManager.java:679)
at org.datanucleus.store.rdbms.query.RDBMSQueryUtils.getStatementForCandidates(RDBMSQueryUtils.java:408)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileQueryFull(JDOQLQuery.java:947)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileInternal(JDOQLQuery.java:370)
at org.datanucleus.store.query.Query.executeQuery(Query.java:1744)
at org.datanucleus.store.query.Query.executeWithArray(Query.java:1672)
at org.datanucleus.store.query.Query.execute(Query.java:1654)
at org.datanucleus.api.jdo.JDOQuery.execute(JDOQuery.java:221)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.ensureDbInit(MetaStoreDirectSql.java:183)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.(MetaStoreDirectSql.java:137)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:295)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:183)
at org.apache.spark.sql.hive.client.HiveClientImpl.(HiveClientImpl.scala:117)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:271)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:214)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:114)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:102)
at org.apache.spark.sql.hive.thriftserver.SparkSQLEnv$.init(SparkSQLEnv.scala:53)
at org.apache.spark.sql.hive.thriftserver.HiveThriftServer2$.main(HiveThriftServer2.scala:79)
at org.apache.spark.sql.hive.thriftserver.HiveThriftServer2.main(HiveThriftServer2.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.sql.SQLException: The isolation level ‘SERIALIZABLE’ is not supported. Set tidb_skip_isolation_level_check=1 to skip this error
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:965)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3973)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3909)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2527)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2680)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2480)
at com.mysql.jdbc.ConnectionImpl.setTransactionIsolation(ConnectionImpl.java:5099)
at com.jolbox.bonecp.ConnectionHandle.setTransactionIsolation(ConnectionHandle.java:1355)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:447)
… 79 more
Nested Throwables StackTrace:
java.sql.SQLException: The isolation level ‘SERIALIZABLE’ is not supported. Set tidb_skip_isolation_level_check=1 to skip this error
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:965)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3973)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3909)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2527)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2680)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2480)
at com.mysql.jdbc.ConnectionImpl.setTransactionIsolation(ConnectionImpl.java:5099)
at com.jolbox.bonecp.ConnectionHandle.setTransactionIsolation(ConnectionHandle.java:1355)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:447)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.getCurrentConnection(AbstractSchemaTransaction.java:90)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.performTablesValidation(RDBMSStoreManager.java:3380)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.addClassTablesAndValidate(RDBMSStoreManager.java:3190)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.run(RDBMSStoreManager.java:2841)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.execute(AbstractSchemaTransaction.java:122)
at org.datanucleus.store.rdbms.RDBMSStoreManager.addClasses(RDBMSStoreManager.java:1605)
at org.datanucleus.store.AbstractStoreManager.addClass(AbstractStoreManager.java:954)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getDatastoreClass(RDBMSStoreManager.java:679)
at org.datanucleus.store.rdbms.query.RDBMSQueryUtils.getStatementForCandidates(RDBMSQueryUtils.java:408)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileQueryFull(JDOQLQuery.java:947)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileInternal(JDOQLQuery.java:370)
at org.datanucleus.store.query.Query.executeQuery(Query.java:1744)
at org.datanucleus.store.query.Query.executeWithArray(Query.java:1672)
at org.datanucleus.store.query.Query.execute(Query.java:1654)
at org.datanucleus.api.jdo.JDOQuery.execute(JDOQuery.java:221)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.ensureDbInit(MetaStoreDirectSql.java:183)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.(MetaStoreDirectSql.java:137)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:295)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:183)
at org.apache.spark.sql.hive.client.HiveClientImpl.(HiveClientImpl.scala:117)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:271)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:214)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:114)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:102)
at org.apache.spark.sql.hive.thriftserver.SparkSQLEnv$.init(SparkSQLEnv.scala:53)
at org.apache.spark.sql.hive.thriftserver.HiveThriftServer2$.main(HiveThriftServer2.scala:79)
at org.apache.spark.sql.hive.thriftserver.HiveThriftServer2.main(HiveThriftServer2.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)

此异常是什么原因引起,该如何解决?

报错信息说的比较清晰了, 因为 tidb 不支持 SeRIALIZABLE。 需要设置 tidb_skip_isolation_level_check=1

这个设置是运行一下“set @@tidb_skip_isolation_level_check = 1”就可以了吗?整个集群用重启吗?

无需重启集群。 需要设置 global 级别。

已通过运行“set GLOBAL tidb_skip_isolation_level_check = 1”设置全局环境变量,再次启动Spark Thrift Server一切正常,问题得到解决,非常感谢指导帮助!

学习了

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